Changes in markdown after sync Windows and Linux Joplin

I use Joplin 2.8.8 (prod, win32) in a Windows device and Joplin 2.8.8 (prod, Linux) in Fedora Workstation. I only use markdown editor to make edits. After sync in Joplin Linux, I notice changes are made to markdown notes. Some examples:
(1) An extra line may appear underneath headings
(2) horizontal line, "---" is changed to "* * *"
(3) Footnote, [^ref] is changed to irritating <sup>[\[2\]](#ref)</sup>.
Markdown settings between two Joplins are identical.
Why that happens? Any fixes?

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